J3_6OLG_043

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAUAC*GGC*GUG

Length

12 nucleotides

Bulged bases

6OLG|1|A4|U|12

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A4|C|9
6OLG|1|A4|C|10
6OLG|1|A4|A|11
6OLG|1|A4|U|12
6OLG|1|A4|A|13
6OLG|1|A4|C|14
*
6OLG|1|A4|G|65
6OLG|1|A4|G|66
6OLG|1|A4|C|67
*
6OLG|1|A4|G|108
6OLG|1|A4|U|109
6OLG|1|A4|G|110

Current chains

Chain A4

5S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain AD

60S ribosomal protein L5

Chain AI

60S ribosomal protein L10

Chain AT

60S ribosomal protein L21