J3_6OLI_019

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUCUCC*GGCGG*CCGGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|C|1082
6OLI|1|t|U|1083
6OLI|1|t|C|1084
6OLI|1|t|U|1085
6OLI|1|t|C|1086
6OLI|1|t|C|1087
*
6OLI|1|t|G|1148
6OLI|1|t|G|1149
6OLI|1|t|C|1150
6OLI|1|t|G|1151
6OLI|1|t|G|1152
*
6OLI|1|t|C|1175
6OLI|1|t|C|1176
6OLI|1|t|G|1177
6OLI|1|t|G|1178
6OLI|1|t|G|1179

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain F

60S ribosomal protein L5