J3_6OLI_022

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GACGG*CCGCUAAGG*CAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|1950
6OLI|1|t|A|1951
6OLI|1|t|C|1952
6OLI|1|t|G|1953
6OLI|1|t|G|1954
*
6OLI|1|t|C|1974
6OLI|1|t|C|1975
6OLI|1|t|G|1976
6OLI|1|t|C|1977
6OLI|1|t|U|1978
6OLI|1|t|A|1979
6OLI|1|t|A|1980
6OLI|1|t|G|1981
6OLI|1|t|G|1982
*
6OLI|1|t|C|1997
6OLI|1|t|A|1998
6OLI|1|t|C|1999

Current chains

Chain t

28S ribosomal RNA

Nearby chains