J3_6OLI_041

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UU*AGAAGC*GGUGGA

Length

14 nucleotides

Bulged bases

6OLI|1|t|A|1787

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|U|1708
6OLI|1|t|U|1709
*
6OLI|1|t|A|1784
6OLI|1|t|G|1785
6OLI|1|t|A|1786
6OLI|1|t|A|1787
6OLI|1|t|G|1788
6OLI|1|t|C|1789
*
6OLI|1|t|G|1813
6OLI|1|t|G|1814
6OLI|1|t|U|1815
6OLI|1|t|G|1816
6OLI|1|t|G|1817
6OLI|1|t|A|1818

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L7

Chain U

60S ribosomal protein L21

Chain c

60S ribosomal protein L29