J3_6OLI_042
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CGGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 6OLI|1|t|C|2449, 6OLI|1|t|A|2451, 6OLI|1|t|G|2454
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLI|1|t|A|2430
6OLI|1|t|G|2431
6OLI|1|t|A|2432
6OLI|1|t|U|2433
6OLI|1|t|G|2434
6OLI|1|t|G|2435
*
6OLI|1|t|C|2444
6OLI|1|t|G|2445
6OLI|1|t|U|2446
6OLI|1|t|U|2447
6OLI|1|t|C|2448
6OLI|1|t|C|2449
6OLI|1|t|G|2450
6OLI|1|t|A|2451
6OLI|1|t|A|2452
6OLI|1|t|G|2453
6OLI|1|t|G|2454
6OLI|1|t|G|2455
*
6OLI|1|t|C|2480
6OLI|1|t|G|2481
6OLI|1|t|G|2482
6OLI|1|t|C|2483
6OLI|1|t|C|2484
6OLI|1|t|G|2485
6OLI|1|t|A|2486
6OLI|1|t|U|2487
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain I
- 60S ribosomal protein L7a
- Chain O
- 60S ribosomal protein L15
- Chain Y
- 60S ribosomal protein L23a
- Chain k
- 60S ribosomal protein L37
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