J3_6OLZ_004

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACC*GAGGGAAGCGAGACGUCGCCG*CACGGGGU

Length

32 nucleotides

Bulged bases

6OLZ|1|A2|A|947, 6OLZ|1|A2|C|950, 6OLZ|1|A2|G|953, 6OLZ|1|A2|C|955, 6OLZ|1|A2|U|958, 6OLZ|1|A2|G|1264

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|A2|A|702
6OLZ|1|A2|C|703
6OLZ|1|A2|C|704
*
6OLZ|1|A2|G|942
6OLZ|1|A2|A|943
6OLZ|1|A2|G|944
6OLZ|1|A2|G|945
6OLZ|1|A2|G|946
6OLZ|1|A2|A|947
6OLZ|1|A2|A|948
6OLZ|1|A2|G|949
6OLZ|1|A2|C|950
6OLZ|1|A2|G|951
6OLZ|1|A2|A|952
6OLZ|1|A2|G|953
6OLZ|1|A2|A|954
6OLZ|1|A2|C|955
6OLZ|1|A2|G|957
6OLZ|1|A2|U|958
6OLZ|1|A2|C|959
6OLZ|1|A2|G|960
6OLZ|1|A2|C|961
6OLZ|1|A2|C|962
6OLZ|1|A2|G|963
*
6OLZ|1|A2|C|1261
6OLZ|1|A2|A|1262
6OLZ|1|A2|C|1263
6OLZ|1|A2|G|1264
6OLZ|1|A2|G|1265
6OLZ|1|A2|G|1266
6OLZ|1|A2|G|1267
6OLZ|1|A2|U|1268

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

60S ribosomal protein L4

Chain AE

60S ribosomal protein L6

Chain AF

60S ribosomal protein L7

Chain Ae

60S ribosomal protein L32

Chain Af

60S ribosomal protein L35a