J3_6OLZ_019

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAU*GCUUCUGGG*CACAAGG

Length

19 nucleotides

Bulged bases

6OLZ|1|A2|U|4946, 6OLZ|1|A2|U|4947, 6OLZ|1|A2|U|4949, 6OLZ|1|A2|A|5019

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|A2|C|4928
6OLZ|1|A2|A|4929
6OLZ|1|A2|U|4930
*
6OLZ|1|A2|G|4944
6OLZ|1|A2|C|4945
6OLZ|1|A2|U|4946
6OLZ|1|A2|U|4947
6OLZ|1|A2|C|4948
6OLZ|1|A2|U|4949
6OLZ|1|A2|G|4950
6OLZ|1|A2|G|4951
6OLZ|1|A2|G|4952
*
6OLZ|1|A2|C|5015
6OLZ|1|A2|A|5016
6OLZ|1|A2|C|5017
6OLZ|1|A2|A|5018
6OLZ|1|A2|A|5019
6OLZ|1|A2|G|5020
6OLZ|1|A2|G|5021

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AP

60S ribosomal protein L17

Chain Ad

60S ribosomal protein L31