3D structure

PDB id
6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
AG*CGCAAAUUA*UAGU
Length
15 nucleotides
Bulged bases
6OLZ|1|B1|U|488
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLZ|1|B1|A|40
6OLZ|1|B1|G|41
*
6OLZ|1|B1|C|481
6OLZ|1|B1|G|482
6OLZ|1|B1|C|483
6OLZ|1|B1|A|484
6OLZ|1|B1|A|485
6OLZ|1|B1|A|486
6OLZ|1|B1|U|487
6OLZ|1|B1|U|488
6OLZ|1|B1|A|489
*
6OLZ|1|B1|U|511
6OLZ|1|B1|A|512
6OLZ|1|B1|G|513
6OLZ|1|B1|U|514

Current chains

Chain B1
18S ribosomal RNA

Nearby chains

Chain BE
40S ribosomal protein S4, Y isoform 1
Chain BJ
40S ribosomal protein S9
Chain BX
40S ribosomal protein S23
Chain BY
40S ribosomal protein S24

Coloring options:

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