J3_6OLZ_034

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAACUAU*AUAG*CGAA

Length

16 nucleotides

Bulged bases

6OLZ|1|A2|A|1516, 6OLZ|1|A2|G|1623, 6OLZ|1|A2|A|1624

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|A2|U|1513
6OLZ|1|A2|G|1514
6OLZ|1|A2|A|1515
6OLZ|1|A2|A|1516
6OLZ|1|A2|C|1517
6OLZ|1|A2|U|1518
6OLZ|1|A2|A|1519
6OLZ|1|A2|U|1520
*
6OLZ|1|A2|A|1603
6OLZ|1|A2|U|1604
6OLZ|1|A2|A|1605
6OLZ|1|A2|G|1606
*
6OLZ|1|A2|C|1622
6OLZ|1|A2|G|1623
6OLZ|1|A2|A|1624
6OLZ|1|A2|A|1625

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AN

60S ribosomal protein L15

Chain Aj

60S ribosomal protein L37

Chain Al

60S ribosomal protein L39