J3_6OM0_038
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AC(B8Q)AG*CCAGUAA*UGAUU(A2M)AGU
- Length
- 21 nucleotides
- Bulged bases
- 6OM0|1|S2|C|1646, 6OM0|1|S2|U|1676, 6OM0|1|S2|G|1680
- QA status
- Modified nucleotides: B8Q, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OM0|1|S2|A|1217
6OM0|1|S2|C|1218
6OM0|1|S2|B8Q|1219
6OM0|1|S2|A|1220
6OM0|1|S2|G|1221
*
6OM0|1|S2|C|1645
6OM0|1|S2|C|1646
6OM0|1|S2|A|1647
6OM0|1|S2|G|1648
6OM0|1|S2|U|1649
6OM0|1|S2|A|1650
6OM0|1|S2|A|1651
*
6OM0|1|S2|U|1673
6OM0|1|S2|G|1674
6OM0|1|S2|A|1675
6OM0|1|S2|U|1676
6OM0|1|S2|U|1677
6OM0|1|S2|A2M|1678
6OM0|1|S2|A|1679
6OM0|1|S2|G|1680
6OM0|1|S2|U|1681
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SA
- 40S ribosomal protein SA
- Chain SC
- 40S ribosomal protein S2
- Chain SF
- 40S ribosomal protein S5
- Chain SQ
- 40S ribosomal protein S16
- Chain SV
- 40S ribosomal protein S21
- Chain Sc
- 40S ribosomal protein S28
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