J3_6OM0_041

3D structure

PDB id

6OM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCUCC*GGCGGG*CCCGGG

Length

18 nucleotides

Bulged bases

6OM0|1|t|G|1149

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM0|1|t|C|1082
6OM0|1|t|U|1083
6OM0|1|t|C|1084
6OM0|1|t|U|1085
6OM0|1|t|C|1086
6OM0|1|t|C|1087
*
6OM0|1|t|G|1148
6OM0|1|t|G|1149
6OM0|1|t|C|1150
6OM0|1|t|G|1151
6OM0|1|t|G|1152
6OM0|1|t|G|1153
*
6OM0|1|t|C|1174
6OM0|1|t|C|1175
6OM0|1|t|C|1176
6OM0|1|t|G|1177
6OM0|1|t|G|1178
6OM0|1|t|G|1179

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain F

60S ribosomal protein L5