J3_6OM0_046
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCGGUUGGCCUCGGAUAGCCGGUC*GGGUCCGGUGCGGAGUGCCCUUC*GCACCGCACGUUCGUG
- Length
- 63 nucleotides
- Bulged bases
- 6OM0|1|t|C|4718, 6OM0|1|t|C|4719, 6OM0|1|t|U|4725, 6OM0|1|t|U|4827, 6OM0|1|t|G|4828, 6OM0|1|t|G|4830, 6OM0|1|t|G|4833, 6OM0|1|t|U|4839, 6OM0|1|t|U|4840, 6OM0|1|t|A|4896, 6OM0|1|t|C|4898, 6OM0|1|t|A|4901, 6OM0|1|t|C|4902, 6OM0|1|t|U|4908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OM0|1|t|U|4710
6OM0|1|t|C|4711
6OM0|1|t|G|4712
6OM0|1|t|G|4713
6OM0|1|t|U|4714
6OM0|1|t|U|4715
6OM0|1|t|G|4716
6OM0|1|t|G|4717
6OM0|1|t|C|4718
6OM0|1|t|C|4719
6OM0|1|t|U|4720
6OM0|1|t|C|4721
6OM0|1|t|G|4722
6OM0|1|t|G|4723
6OM0|1|t|A|4724
6OM0|1|t|U|4725
6OM0|1|t|A|4726
6OM0|1|t|G|4727
6OM0|1|t|C|4728
6OM0|1|t|C|4729
6OM0|1|t|G|4730
6OM0|1|t|G|4731
6OM0|1|t|U|4732
6OM0|1|t|C|4733
*
6OM0|1|t|G|4819
6OM0|1|t|G|4820
6OM0|1|t|G|4821
6OM0|1|t|U|4822
6OM0|1|t|C|4823
6OM0|1|t|C|4824
6OM0|1|t|G|4825
6OM0|1|t|G|4826
6OM0|1|t|U|4827
6OM0|1|t|G|4828
6OM0|1|t|C|4829
6OM0|1|t|G|4830
6OM0|1|t|G|4831
6OM0|1|t|A|4832
6OM0|1|t|G|4833
6OM0|1|t|U|4834
6OM0|1|t|G|4835
6OM0|1|t|C|4836
6OM0|1|t|C|4837
6OM0|1|t|C|4838
6OM0|1|t|U|4839
6OM0|1|t|U|4840
6OM0|1|t|C|4841
*
6OM0|1|t|G|4894
6OM0|1|t|C|4895
6OM0|1|t|A|4896
6OM0|1|t|C|4897
6OM0|1|t|C|4898
6OM0|1|t|G|4899
6OM0|1|t|C|4900
6OM0|1|t|A|4901
6OM0|1|t|C|4902
6OM0|1|t|G|4903
6OM0|1|t|U|4904
6OM0|1|t|U|4905
6OM0|1|t|C|4906
6OM0|1|t|G|4907
6OM0|1|t|U|4908
6OM0|1|t|G|4909
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain J
- 60S ribosomal protein L9
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain g
- 60S ribosomal protein L35a
Coloring options: