J3_6OM6_005

3D structure

PDB id

6OM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGGA*UUUAAAG*CACU

Length

15 nucleotides

Bulged bases

6OM6|1|1|U|1083

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM6|1|1|A|1054
6OM6|1|1|G|1055
6OM6|1|1|G|1056
6OM6|1|1|A|1057
*
6OM6|1|1|U|1081
6OM6|1|1|U|1082
6OM6|1|1|U|1083
6OM6|1|1|A|1084
6OM6|1|1|A|1085
6OM6|1|1|A|1086
6OM6|1|1|G|1087
*
6OM6|1|1|C|1102
6OM6|1|1|A|1103
6OM6|1|1|C|1104
6OM6|1|1|U|1105

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L36