J3_6OPE_009

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAC*GGUGCC*GGAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OPE|1|QA|G|1003
6OPE|1|QA|A|1004
6OPE|1|QA|A|1005
6OPE|1|QA|C|1006
*
6OPE|1|QA|G|1023
6OPE|1|QA|G|1024
6OPE|1|QA|U|1025
6OPE|1|QA|G|1026
6OPE|1|QA|C|1027
6OPE|1|QA|C|1028
*
6OPE|1|QA|G|1033
6OPE|1|QA|G|1034
6OPE|1|QA|A|1035
6OPE|1|QA|G|1036
6OPE|1|QA|C|1037

Current chains

Chain QA

16S rRNA

Nearby chains

Chain YA

Large subunit ribosomal RNA; LSU rRNA