J3_6OPE_048

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAG*CUUUAAAGAGUG*CUCAC

Length

21 nucleotides

Bulged bases

6OPE|1|YA|A|1084, 6OPE|1|YA|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OPE|1|YA|G|1055
6OPE|1|YA|G|1056
6OPE|1|YA|A|1057
6OPE|1|YA|G|1058
*
6OPE|1|YA|C|1080
6OPE|1|YA|U|1081
6OPE|1|YA|U|1082
6OPE|1|YA|U|1083
6OPE|1|YA|A|1084
6OPE|1|YA|A|1085
6OPE|1|YA|A|1086
6OPE|1|YA|G|1087
6OPE|1|YA|A|1088
6OPE|1|YA|G|1089
6OPE|1|YA|U|1090
6OPE|1|YA|G|1091
*
6OPE|1|YA|C|1100
6OPE|1|YA|U|1101
6OPE|1|YA|C|1102
6OPE|1|YA|A|1103
6OPE|1|YA|C|1104

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36

Chain YH

50S ribosomal protein L6