J3_6OPE_060

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

6OPE|1|QA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OPE|1|QA|C|990
6OPE|1|QA|U|991
6OPE|1|QA|U|992
6OPE|1|QA|G|993
6OPE|1|QA|A|994
6OPE|1|QA|C|995
6OPE|1|QA|A|996
6OPE|1|QA|U|997
6OPE|1|QA|G|998
*
6OPE|1|QA|C|1043
6OPE|1|QA|A|1044
6OPE|1|QA|C|1045
6OPE|1|QA|A|1046
6OPE|1|QA|G|1047
*
6OPE|1|QA|C|1210
6OPE|1|QA|U|1211
6OPE|1|QA|U|1212
6OPE|1|QA|A|1213
6OPE|1|QA|C|1214
6OPE|1|QA|G|1215

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QN

30S ribosomal protein S14 type Z

Chain YA

Large subunit ribosomal RNA; LSU rRNA