J3_6OPE_066

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCAUAG*CGC*GUCG

Length

13 nucleotides

Bulged bases

6OPE|1|RB|C|108

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OPE|1|RB|C|11
6OPE|1|RB|C|12
6OPE|1|RB|A|13
6OPE|1|RB|U|14
6OPE|1|RB|A|15
6OPE|1|RB|G|16
*
6OPE|1|RB|C|68
6OPE|1|RB|G|69
6OPE|1|RB|C|70
*
6OPE|1|RB|G|106
6OPE|1|RB|U|107
6OPE|1|RB|C|108
6OPE|1|RB|G|109

Current chains

Chain RB

5S rRNA

Nearby chains

Chain R0

50S ribosomal protein L27

Chain RA

Large subunit ribosomal RNA; LSU rRNA

Chain RS

50S ribosomal protein L18

Chain RZ

50S ribosomal protein L25