J3_6ORD_054
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CC*GUGGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6ORD|1|YA|G|2833, 6ORD|1|YA|A|2835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ORD_054 not in the Motif Atlas
- Homologous match to J3_7RQB_014
- Geometric discrepancy: 0.0798
- The information below is about J3_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_95952.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6ORD|1|YA|C|2814
6ORD|1|YA|C|2815
*
6ORD|1|YA|G|2831
6ORD|1|YA|U|2832
6ORD|1|YA|G|2833
6ORD|1|YA|G|2834
6ORD|1|YA|A|2835
6ORD|1|YA|U|2836
*
6ORD|1|YA|A|2882
6ORD|1|YA|A|2883
6ORD|1|YA|U|2884
6ORD|1|YA|C|2885
6ORD|1|YA|G|2886
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y5
- 50S ribosomal protein L32
- Chain YE
- 50S ribosomal protein L3
- Chain YR
- 50S ribosomal protein L17
Coloring options: