J3_6ORD_071

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

6ORD|1|XA|G|1026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ORD_071 not in the Motif Atlas

Homologous match to J3_6CZR_022

Geometric discrepancy: 0.5191

The information below is about J3_6CZR_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORD|1|XA|G|1002
6ORD|1|XA|G|1003
6ORD|1|XA|A|1004
6ORD|1|XA|A|1005
6ORD|1|XA|C|1006
*
6ORD|1|XA|G|1023
6ORD|1|XA|G|1024
6ORD|1|XA|U|1025
6ORD|1|XA|G|1026
6ORD|1|XA|C|1027
6ORD|1|XA|C|1028
*
6ORD|1|XA|G|1033
6ORD|1|XA|G|1034
6ORD|1|XA|A|1035
6ORD|1|XA|G|1036
6ORD|1|XA|C|1037
6ORD|1|XA|C|1038

Current chains

Chain XA

16S rRNA

Nearby chains