J3_6ORE_035

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

6ORE|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ORE_035 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1313

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

6ORE|1|2|C|990
6ORE|1|2|U|991
6ORE|1|2|U|992
6ORE|1|2|G|993
6ORE|1|2|A|994
6ORE|1|2|C|995
6ORE|1|2|A|996
6ORE|1|2|U|997
*
6ORE|1|2|A|1044
6ORE|1|2|C|1045
6ORE|1|2|A|1046
6ORE|1|2|G|1047
*
6ORE|1|2|C|1210
6ORE|1|2|U|1211
6ORE|1|2|U|1212
6ORE|1|2|A|1213
6ORE|1|2|C|1214
6ORE|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14