3D structure

PDB id
6ORL (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 pre-accommodated 70S complex at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
UCGACCCCUAAG*CGAUGGGAAAC*GUA
Length
26 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ORL|1|1|U|1344
6ORL|1|1|C|1345
6ORL|1|1|G|1346
6ORL|1|1|A|1347
6ORL|1|1|C|1348
6ORL|1|1|C|1349
6ORL|1|1|C|1350
6ORL|1|1|C|1351
6ORL|1|1|U|1352
6ORL|1|1|A|1353
6ORL|1|1|A|1354
6ORL|1|1|G|1355
*
6ORL|1|1|C|1376
6ORL|1|1|G|1377
6ORL|1|1|A|1378
6ORL|1|1|U|1379
6ORL|1|1|G|1380
6ORL|1|1|G|1381
6ORL|1|1|G|1382
6ORL|1|1|A|1383
6ORL|1|1|A|1384
6ORL|1|1|A|1385
6ORL|1|1|C|1386
*
6ORL|1|1|G|1401
6ORL|1|1|U|1402
6ORL|1|1|A|1403

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L2
Chain T
50S ribosomal protein L23
Chain d
50S ribosomal protein L34

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