J3_6OSI_015

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OSI_015 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.1003

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

6OSI|1|RA|C|698
6OSI|1|RA|A|699
6OSI|1|RA|G|700
*
6OSI|1|RA|C|732
6OSI|1|RA|G|733
6OSI|1|RA|A|734
6OSI|1|RA|A|735
6OSI|1|RA|C|736
*
6OSI|1|RA|G|760
6OSI|1|RA|A|761
6OSI|1|RA|U|762
6OSI|1|RA|G|763

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2