J3_6OSI_068

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GCACAAGCG*CGCUAGUAAUC*GGUGAAUACGUUCCC

Length

35 nucleotides

Bulged bases

6OSI|1|XA|U|1381

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OSI|1|XA|G|933
6OSI|1|XA|C|934
6OSI|1|XA|A|935
6OSI|1|XA|C|936
6OSI|1|XA|A|937
6OSI|1|XA|A|938
6OSI|1|XA|G|939
6OSI|1|XA|C|940
6OSI|1|XA|G|941
*
6OSI|1|XA|C|1342
6OSI|1|XA|G|1343
6OSI|1|XA|C|1344
6OSI|1|XA|U|1345
6OSI|1|XA|A|1346
6OSI|1|XA|G|1347
6OSI|1|XA|U|1348
6OSI|1|XA|A|1349
6OSI|1|XA|A|1350
6OSI|1|XA|U|1351
6OSI|1|XA|C|1352
*
6OSI|1|XA|G|1370
6OSI|1|XA|G|1371
6OSI|1|XA|U|1372
6OSI|1|XA|G|1373
6OSI|1|XA|A|1374
6OSI|1|XA|A|1375
6OSI|1|XA|U|1376
6OSI|1|XA|A|1377
6OSI|1|XA|C|1378
6OSI|1|XA|G|1379
6OSI|1|XA|U|1380
6OSI|1|XA|U|1381
6OSI|1|XA|C|1382
6OSI|1|XA|C|1383
6OSI|1|XA|C|1384

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10

Chain XU

30S ribosomal protein Thx