J3_6OSQ_003

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

6OSQ|1|1|U|686, 6OSQ|1|1|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OSQ_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0987

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

6OSQ|1|1|U|683
6OSQ|1|1|G|684
6OSQ|1|1|A|685
6OSQ|1|1|U|686
6OSQ|1|1|C|687
6OSQ|1|1|U|688
6OSQ|1|1|A|689
*
6OSQ|1|1|U|773
6OSQ|1|1|G|774
6OSQ|1|1|G|775
*
6OSQ|1|1|C|791
6OSQ|1|1|A|792
6OSQ|1|1|A|793
6OSQ|1|1|A|794

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2

Chain d

50S ribosomal protein L34