J3_6OSQ_040

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

6OSQ|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OSQ_040 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.157

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

6OSQ|1|2|C|990
6OSQ|1|2|U|991
6OSQ|1|2|U|992
6OSQ|1|2|G|993
6OSQ|1|2|A|994
6OSQ|1|2|C|995
6OSQ|1|2|A|996
6OSQ|1|2|U|997
*
6OSQ|1|2|A|1044
6OSQ|1|2|C|1045
6OSQ|1|2|A|1046
6OSQ|1|2|G|1047
*
6OSQ|1|2|C|1210
6OSQ|1|2|U|1211
6OSQ|1|2|U|1212
6OSQ|1|2|A|1213
6OSQ|1|2|C|1214
6OSQ|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain A

Peptide chain release factor 1

Chain s

30S ribosomal protein S14