3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GUGGAUGC*GCGAAAAGAAC*GAGUGAAAAAGAACCUGAAAC
Length
40 nucleotides
Bulged bases
6OUO|1|1|A|504, 6OUO|1|1|A|508
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OUO|1|1|G|24
6OUO|1|1|U|25
6OUO|1|1|G|26
6OUO|1|1|G|27
6OUO|1|1|A|28
6OUO|1|1|U|29
6OUO|1|1|G|30
6OUO|1|1|C|31
*
6OUO|1|1|G|474
6OUO|1|1|C|475
6OUO|1|1|G|476
6OUO|1|1|A|477
6OUO|1|1|A|478
6OUO|1|1|A|479
6OUO|1|1|A|480
6OUO|1|1|G|481
6OUO|1|1|A|482
6OUO|1|1|A|483
6OUO|1|1|C|484
*
6OUO|1|1|G|496
6OUO|1|1|A|497
6OUO|1|1|G|498
6OUO|1|1|U|499
6OUO|1|1|G|500
6OUO|1|1|A|501
6OUO|1|1|A|502
6OUO|1|1|A|503
6OUO|1|1|A|504
6OUO|1|1|A|505
6OUO|1|1|G|506
6OUO|1|1|A|507
6OUO|1|1|A|508
6OUO|1|1|C|509
6OUO|1|1|C|510
6OUO|1|1|U|511
6OUO|1|1|G|512
6OUO|1|1|A|513
6OUO|1|1|A|514
6OUO|1|1|A|515
6OUO|1|1|C|516

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain U
50S ribosomal protein L24
Chain b
50S ribosomal protein L32

Coloring options:

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