J3_6OUO_033
3D structure
- PDB id
- 6OUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF2 accommodated state bound 70S complex at long incubation time
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCAC*GUCAUAGUGAUCC*GCUCAAC
- Length
- 24 nucleotides
- Bulged bases
- 6OUO|1|1|A|2388, 6OUO|1|1|U|2390, 6OUO|1|1|A|2426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OUO_033 not in the Motif Atlas
- Homologous match to J3_4WF9_019
- Geometric discrepancy: 0.1653
- The information below is about J3_4WF9_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39320.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-F-F-F-F-F-F-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
6OUO|1|1|G|2282
6OUO|1|1|C|2283
6OUO|1|1|A|2284
6OUO|1|1|C|2285
*
6OUO|1|1|G|2383
6OUO|1|1|U|2384
6OUO|1|1|C|2385
6OUO|1|1|A|2386
6OUO|1|1|U|2387
6OUO|1|1|A|2388
6OUO|1|1|G|2389
6OUO|1|1|U|2390
6OUO|1|1|G|2391
6OUO|1|1|A|2392
6OUO|1|1|U|2393
6OUO|1|1|C|2394
6OUO|1|1|C|2395
*
6OUO|1|1|G|2421
6OUO|1|1|C|2422
6OUO|1|1|U|2423
6OUO|1|1|C|2424
6OUO|1|1|A|2425
6OUO|1|1|A|2426
6OUO|1|1|C|2427
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain c
- 50S ribosomal protein L33
- Chain e
- 50S ribosomal protein L35
Coloring options: