3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UCGACC*GAAA*UA
Length
12 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6OUO_039 not in the Motif Atlas
Homologous match to J3_5J7L_043
Geometric discrepancy: 0.1204
The information below is about J3_5J7L_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_92705.1
Basepair signature
cWW-F-cWW-F-F-F-F-F-cWW
Number of instances in this motif group
1

Unit IDs

6OUO|1|1|U|1344
6OUO|1|1|C|1345
6OUO|1|1|G|1346
6OUO|1|1|A|1347
6OUO|1|1|C|1348
6OUO|1|1|C|1349
*
6OUO|1|1|G|1382
6OUO|1|1|A|1383
6OUO|1|1|A|1384
6OUO|1|1|A|1385
*
6OUO|1|1|U|1402
6OUO|1|1|A|1403

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain T
50S ribosomal protein L23

Coloring options:


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