J3_6OXI_019

3D structure

PDB id

6OXI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)

Experimental method

X-RAY DIFFRACTION

Resolution

3.49 Å

Loop

Sequence

GGAGG*CCUUUAAAG*CAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OXI|1|RA|G|1055
6OXI|1|RA|G|1056
6OXI|1|RA|A|1057
6OXI|1|RA|G|1058
6OXI|1|RA|G|1059
*
6OXI|1|RA|C|1079
6OXI|1|RA|C|1080
6OXI|1|RA|U|1081
6OXI|1|RA|U|1082
6OXI|1|RA|U|1083
6OXI|1|RA|A|1084
6OXI|1|RA|A|1085
6OXI|1|RA|A|1086
6OXI|1|RA|G|1087
*
6OXI|1|RA|C|1102
6OXI|1|RA|A|1103
6OXI|1|RA|C|1104

Current chains

Chain RA

23S rRNA

Nearby chains