J3_6PC5_005

3D structure

PDB id

6PC5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 46 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GA*UUAAAGAAAG*CUCAC

Length

17 nucleotides

Bulged bases

6PC5|1|I|A|1084, 6PC5|1|I|A|1088

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC5|1|I|G|1056
6PC5|1|I|A|1057
*
6PC5|1|I|U|1082
6PC5|1|I|U|1083
6PC5|1|I|A|1084
6PC5|1|I|A|1085
6PC5|1|I|A|1086
6PC5|1|I|G|1087
6PC5|1|I|A|1088
6PC5|1|I|A|1089
6PC5|1|I|A|1090
6PC5|1|I|G|1091
*
6PC5|1|I|C|1100
6PC5|1|I|U|1101
6PC5|1|I|C|1102
6PC5|1|I|A|1103
6PC5|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains