J3_6PCH_005

3D structure

PDB id

6PCH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAUGUUGG*CCAUCAUUUAAAGAAAG*CUCAC

Length

30 nucleotides

Bulged bases

6PCH|1|I|U|1061, 6PCH|1|I|U|1078, 6PCH|1|I|A|1084

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCH|1|I|G|1056
6PCH|1|I|A|1057
6PCH|1|I|U|1058
6PCH|1|I|G|1059
6PCH|1|I|U|1060
6PCH|1|I|U|1061
6PCH|1|I|G|1062
6PCH|1|I|G|1063
*
6PCH|1|I|C|1075
6PCH|1|I|C|1076
6PCH|1|I|A|1077
6PCH|1|I|U|1078
6PCH|1|I|C|1079
6PCH|1|I|A|1080
6PCH|1|I|U|1081
6PCH|1|I|U|1082
6PCH|1|I|U|1083
6PCH|1|I|A|1084
6PCH|1|I|A|1085
6PCH|1|I|A|1086
6PCH|1|I|G|1087
6PCH|1|I|A|1088
6PCH|1|I|A|1089
6PCH|1|I|A|1090
6PCH|1|I|G|1091
*
6PCH|1|I|C|1100
6PCH|1|I|U|1101
6PCH|1|I|C|1102
6PCH|1|I|A|1103
6PCH|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains