J3_6PCH_019

3D structure

PDB id

6PCH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGAUCUA*UGGGG*CAAUCAAAC

Length

22 nucleotides

Bulged bases

6PCH|1|I|U|686, 6PCH|1|I|A|789, 6PCH|1|I|U|790, 6PCH|1|I|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCH|1|I|G|682
6PCH|1|I|U|683
6PCH|1|I|G|684
6PCH|1|I|A|685
6PCH|1|I|U|686
6PCH|1|I|C|687
6PCH|1|I|U|688
6PCH|1|I|A|689
*
6PCH|1|I|U|773
6PCH|1|I|G|774
6PCH|1|I|G|775
6PCH|1|I|G|776
6PCH|1|I|G|777
*
6PCH|1|I|C|787
6PCH|1|I|A|788
6PCH|1|I|A|789
6PCH|1|I|U|790
6PCH|1|I|C|791
6PCH|1|I|A|792
6PCH|1|I|A|793
6PCH|1|I|A|794
6PCH|1|I|C|795

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2

Chain M

50S ribosomal protein L4