J3_6PCS_003

3D structure

PDB id

6PCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 40e

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUGAUCUA*UGG*CAAAC

Length

16 nucleotides

Bulged bases

6PCS|1|I|U|686, 6PCS|1|I|A|792, 6PCS|1|I|A|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCS|1|I|G|682
6PCS|1|I|U|683
6PCS|1|I|G|684
6PCS|1|I|A|685
6PCS|1|I|U|686
6PCS|1|I|C|687
6PCS|1|I|U|688
6PCS|1|I|A|689
*
6PCS|1|I|U|773
6PCS|1|I|G|774
6PCS|1|I|G|775
*
6PCS|1|I|C|791
6PCS|1|I|A|792
6PCS|1|I|A|793
6PCS|1|I|A|794
6PCS|1|I|C|795

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L2

Chain M

50S ribosomal protein L4