J3_6PJ6_005

3D structure

PDB id

6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cryo-EM structure of E.coli 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PJ6|1|I|G|1055
6PJ6|1|I|G|1056
6PJ6|1|I|A|1057
6PJ6|1|I|U|1058
*
6PJ6|1|I|A|1080
6PJ6|1|I|U|1081
6PJ6|1|I|U|1082
6PJ6|1|I|U|1083
6PJ6|1|I|A|1084
6PJ6|1|I|A|1085
6PJ6|1|I|A|1086
6PJ6|1|I|G|1087
*
6PJ6|1|I|C|1102
6PJ6|1|I|A|1103
6PJ6|1|I|C|1104

Current chains

Chain I

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L11

Chain m

50S ribosomal protein L36