J3_6PJ6_020

3D structure

PDB id

6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cryo-EM structure of E.coli 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAUGUUG*CAUCAUUUAAAGAAAGC*GCUCAC

Length

31 nucleotides

Bulged bases

6PJ6|1|I|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PJ6|1|I|G|1055
6PJ6|1|I|G|1056
6PJ6|1|I|A|1057
6PJ6|1|I|U|1058
6PJ6|1|I|G|1059
6PJ6|1|I|U|1060
6PJ6|1|I|U|1061
6PJ6|1|I|G|1062
*
6PJ6|1|I|C|1076
6PJ6|1|I|A|1077
6PJ6|1|I|U|1078
6PJ6|1|I|C|1079
6PJ6|1|I|A|1080
6PJ6|1|I|U|1081
6PJ6|1|I|U|1082
6PJ6|1|I|U|1083
6PJ6|1|I|A|1084
6PJ6|1|I|A|1085
6PJ6|1|I|A|1086
6PJ6|1|I|G|1087
6PJ6|1|I|A|1088
6PJ6|1|I|A|1089
6PJ6|1|I|A|1090
6PJ6|1|I|G|1091
6PJ6|1|I|C|1092
*
6PJ6|1|I|G|1099
6PJ6|1|I|C|1100
6PJ6|1|I|U|1101
6PJ6|1|I|C|1102
6PJ6|1|I|A|1103
6PJ6|1|I|C|1104

Current chains

Chain I

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L6

Chain Q

50S ribosomal protein L11

Chain m

50S ribosomal protein L36