J3_6PJ6_022
3D structure
- PDB id
- 6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution cryo-EM structure of E.coli 50S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CU(2MG)*CGGCCG(PSU)AAC(3TD)A(PSU)AACGGUCCUAAGGUAG*CGAAUG
- Length
- 38 nucleotides
- Bulged bases
- 6PJ6|1|I|A|1913, 6PJ6|1|I|C|1914, 6PJ6|1|I|U|1971
- QA status
- Modified nucleotides: 2MG, PSU, 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6PJ6|1|I|C|1833
6PJ6|1|I|U|1834
6PJ6|1|I|2MG|1835
*
6PJ6|1|I|C|1905
6PJ6|1|I|G|1906
6PJ6|1|I|G|1907
6PJ6|1|I|C|1908
6PJ6|1|I|C|1909
6PJ6|1|I|G|1910
6PJ6|1|I|PSU|1911
6PJ6|1|I|A|1912
6PJ6|1|I|A|1913
6PJ6|1|I|C|1914
6PJ6|1|I|3TD|1915
6PJ6|1|I|A|1916
6PJ6|1|I|PSU|1917
6PJ6|1|I|A|1918
6PJ6|1|I|A|1919
6PJ6|1|I|C|1920
6PJ6|1|I|G|1921
6PJ6|1|I|G|1922
6PJ6|1|I|U|1923
6PJ6|1|I|C|1924
6PJ6|1|I|C|1925
6PJ6|1|I|U|1926
6PJ6|1|I|A|1927
6PJ6|1|I|A|1928
6PJ6|1|I|G|1929
6PJ6|1|I|G|1930
6PJ6|1|I|U|1931
6PJ6|1|I|A|1932
6PJ6|1|I|G|1933
*
6PJ6|1|I|C|1967
6PJ6|1|I|G|1968
6PJ6|1|I|A|1969
6PJ6|1|I|A|1970
6PJ6|1|I|U|1971
6PJ6|1|I|G|1972
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
Coloring options: