J3_6PPF_006

3D structure

PDB id

6PPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 45SRbgA ribosomal particle class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAU*AUUUAAAGAGUG*CUCAC

Length

21 nucleotides

Bulged bases

6PPF|1|A|A|1134

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PPF|1|A|G|1101
6PPF|1|A|G|1102
6PPF|1|A|A|1103
6PPF|1|A|U|1104
*
6PPF|1|A|A|1126
6PPF|1|A|U|1127
6PPF|1|A|U|1128
6PPF|1|A|U|1129
6PPF|1|A|A|1130
6PPF|1|A|A|1131
6PPF|1|A|A|1132
6PPF|1|A|G|1133
6PPF|1|A|A|1134
6PPF|1|A|G|1135
6PPF|1|A|U|1136
6PPF|1|A|G|1137
*
6PPF|1|A|C|1146
6PPF|1|A|U|1147
6PPF|1|A|C|1148
6PPF|1|A|A|1149
6PPF|1|A|C|1150

Current chains

Chain A

23S rRNA

Nearby chains