J3_6PPF_018

3D structure

PDB id

6PPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 45SRbgA ribosomal particle class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAUGCC*GGCGAGG*CCUAAG

Length

21 nucleotides

Bulged bases

6PPF|1|A|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PPF|1|A|C|1337
6PPF|1|A|G|1338
6PPF|1|A|A|1339
6PPF|1|A|A|1340
6PPF|1|A|U|1341
6PPF|1|A|G|1342
6PPF|1|A|C|1343
6PPF|1|A|C|1344
*
6PPF|1|A|G|1668
6PPF|1|A|G|1669
6PPF|1|A|C|1670
6PPF|1|A|G|1671
6PPF|1|A|A|1672
6PPF|1|A|G|1673
6PPF|1|A|G|1674
*
6PPF|1|A|C|1682
6PPF|1|A|C|1683
6PPF|1|A|U|1684
6PPF|1|A|A|1685
6PPF|1|A|A|1686
6PPF|1|A|G|1687

Current chains

Chain A

23S rRNA

Nearby chains