J3_6QNQ_053

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGGC*GCUAG*CG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNQ|1|13|C|586
6QNQ|1|13|G|587
6QNQ|1|13|G|588
6QNQ|1|13|C|589
*
6QNQ|1|13|G|650
6QNQ|1|13|C|651
6QNQ|1|13|U|652
6QNQ|1|13|A|653
6QNQ|1|13|G|654
*
6QNQ|1|13|C|754
6QNQ|1|13|G|755

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 3I

30S ribosomal protein S12

Chain 6I

30S ribosomal protein S15

Chain 7E

30S ribosomal protein S8

Chain 8I

30S ribosomal protein S17