3D structure

PDB id
6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome initiation complex (IC) with experimentally assigned potassium ions
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
CGGC*GCUAG*CG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6QNQ|1|13|C|586
6QNQ|1|13|G|587
6QNQ|1|13|G|588
6QNQ|1|13|C|589
*
6QNQ|1|13|G|650
6QNQ|1|13|C|651
6QNQ|1|13|U|652
6QNQ|1|13|A|653
6QNQ|1|13|G|654
*
6QNQ|1|13|C|754
6QNQ|1|13|G|755

Current chains

Chain 13
16S ribosomal RNA

Nearby chains

Chain 3I
30S ribosomal protein S12
Chain 6I
30S ribosomal protein S15
Chain 7E
30S ribosomal protein S8
Chain 8I
30S ribosomal protein S17

Coloring options:

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