J3_6R6G_017
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAU*GCUUCU*AAGG
- Length
- 13 nucleotides
- Bulged bases
- 6R6G|1|5|U|3469
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R6G|1|5|C|3450
6R6G|1|5|A|3451
6R6G|1|5|U|3452
*
6R6G|1|5|G|3466
6R6G|1|5|C|3467
6R6G|1|5|U|3468
6R6G|1|5|U|3469
6R6G|1|5|C|3470
6R6G|1|5|U|3471
*
6R6G|1|5|A|3535
6R6G|1|5|A|3536
6R6G|1|5|G|3537
6R6G|1|5|G|3538
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain AF
- Signal recognition particle RNA; SRP RNA
- Chain B
- uL3
- Chain P
- uL22
- Chain d
- eL31
Coloring options: