J3_6R6P_015
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 6R6P|1|5|U|4117, 6R6P|1|5|U|4118, 6R6P|1|5|C|4119, 6R6P|1|5|U|4120, 6R6P|1|5|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R6P|1|5|G|4091
6R6P|1|5|G|4092
6R6P|1|5|G|4093
6R6P|1|5|G|4094
*
6R6P|1|5|C|4114
6R6P|1|5|G|4115
6R6P|1|5|C|4116
6R6P|1|5|U|4117
6R6P|1|5|U|4118
6R6P|1|5|C|4119
6R6P|1|5|U|4120
6R6P|1|5|G|4121
6R6P|1|5|G|4122
6R6P|1|5|C|4123
6R6P|1|5|G|4124
6R6P|1|5|C|4125
6R6P|1|5|C|4126
6R6P|1|5|A|4127
6R6P|1|5|A|4128
6R6P|1|5|G|4129
*
6R6P|1|5|C|4155
6R6P|1|5|G|4156
6R6P|1|5|A|4157
6R6P|1|5|C|4158
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain G
- eL8
- Chain X
- uL23
- Chain Z
- 60S ribosomal protein L27
- Chain c
- eL30
- Chain g
- eL34
- Chain p
- ribosomal protein eL43
- Chain u
- 40S ribosomal protein S3a
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