J3_6R84_018
3D structure
- PDB id
- 6R84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UCGAUC*GGAAUC*GAA
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R84|1|1|U|1526
6R84|1|1|C|1527
6R84|1|1|G|1528
6R84|1|1|A|1529
6R84|1|1|U|1530
6R84|1|1|C|1531
*
6R84|1|1|G|1591
6R84|1|1|G|1592
6R84|1|1|A|1593
6R84|1|1|A|1594
6R84|1|1|U|1595
6R84|1|1|C|1596
*
6R84|1|1|G|1611
6R84|1|1|A|1612
6R84|1|1|A|1613
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Z
- 60S ribosomal protein L25
- Chain i
- 60S ribosomal protein L34-A
- Chain m
- 60S ribosomal protein L38
- Chain n
- 60S ribosomal protein L39
Coloring options: