J3_6RI5_007

3D structure

PDB id

6RI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAC*GCUAAGGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

6RI5|1|A|A|1263

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RI5|1|A|G|1230
6RI5|1|A|A|1231
6RI5|1|A|C|1232
*
6RI5|1|A|G|1256
6RI5|1|A|C|1257
6RI5|1|A|U|1258
6RI5|1|A|A|1259
6RI5|1|A|A|1260
6RI5|1|A|G|1261
6RI5|1|A|G|1262
6RI5|1|A|A|1263
6RI5|1|A|G|1264
6RI5|1|A|U|1265
6RI5|1|A|G|1266
*
6RI5|1|A|C|1275
6RI5|1|A|U|1276
6RI5|1|A|C|1277
6RI5|1|A|A|1278
6RI5|1|A|C|1279

Current chains

Chain A

25S RNA

Nearby chains