J3_6RM3_015

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUAAUUU*GAGGUAACUUAC*GGCUG

Length

25 nucleotides

Bulged bases

6RM3|1|S60|A|792, 6RM3|1|S60|G|794, 6RM3|1|S60|U|795, 6RM3|1|S60|A|796

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RM3|1|S60|C|773
6RM3|1|S60|U|774
6RM3|1|S60|U|775
6RM3|1|S60|A|776
6RM3|1|S60|A|777
6RM3|1|S60|U|778
6RM3|1|S60|U|779
6RM3|1|S60|U|780
*
6RM3|1|S60|G|791
6RM3|1|S60|A|792
6RM3|1|S60|G|793
6RM3|1|S60|G|794
6RM3|1|S60|U|795
6RM3|1|S60|A|796
6RM3|1|S60|A|797
6RM3|1|S60|C|798
6RM3|1|S60|U|799
6RM3|1|S60|U|800
6RM3|1|S60|A|801
6RM3|1|S60|C|802
*
6RM3|1|S60|G|991
6RM3|1|S60|G|992
6RM3|1|S60|C|993
6RM3|1|S60|U|994
6RM3|1|S60|G|995

Current chains

Chain S60

16S rRNA

Nearby chains

Chain SDD

uS14

Chain SFF

eS31

Chain SP0

uS19

Chain SS0

uS13

Chain SU0

uS10