3D structure

PDB id
6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UUUCAA*UGAGACC*GAUUAAA
Length
20 nucleotides
Bulged bases
6RM3|1|S60|U|866, 6RM3|1|S60|U|958
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6RM3|1|S60|U|864
6RM3|1|S60|U|865
6RM3|1|S60|U|866
6RM3|1|S60|C|867
6RM3|1|S60|A|868
6RM3|1|S60|A|869
*
6RM3|1|S60|U|907
6RM3|1|S60|G|908
6RM3|1|S60|A|909
6RM3|1|S60|G|910
6RM3|1|S60|A|911
6RM3|1|S60|C|912
6RM3|1|S60|C|913
*
6RM3|1|S60|G|955
6RM3|1|S60|A|956
6RM3|1|S60|U|957
6RM3|1|S60|U|958
6RM3|1|S60|A|959
6RM3|1|S60|A|960
6RM3|1|S60|A|961

Current chains

Chain S60
16S rRNA

Nearby chains

Chain SC0
uS5
Chain SD0
uS3
Chain SDD
uS14
Chain SQ0
uS9
Chain SR0
eS17
Chain SU0
uS10

Coloring options:

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