J3_6RM3_024

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCCAUUGUAAU*AGUUGUAAAUGGU*AAUAAUGUACUUG

Length

38 nucleotides

Bulged bases

6RM3|1|L50|C|195, 6RM3|1|L50|U|198, 6RM3|1|L50|G|199, 6RM3|1|L50|U|200, 6RM3|1|L50|U|217, 6RM3|1|L50|A|221, 6RM3|1|L50|C|290, 6RM3|1|L50|U|292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RM3|1|L50|C|192
6RM3|1|L50|U|193
6RM3|1|L50|C|194
6RM3|1|L50|C|195
6RM3|1|L50|A|196
6RM3|1|L50|U|197
6RM3|1|L50|U|198
6RM3|1|L50|G|199
6RM3|1|L50|U|200
6RM3|1|L50|A|201
6RM3|1|L50|A|202
6RM3|1|L50|U|203
*
6RM3|1|L50|A|214
6RM3|1|L50|G|215
6RM3|1|L50|U|216
6RM3|1|L50|U|217
6RM3|1|L50|G|218
6RM3|1|L50|U|219
6RM3|1|L50|A|220
6RM3|1|L50|A|221
6RM3|1|L50|A|222
6RM3|1|L50|U|223
6RM3|1|L50|G|224
6RM3|1|L50|G|225
6RM3|1|L50|U|226
*
6RM3|1|L50|A|281
6RM3|1|L50|A|282
6RM3|1|L50|U|283
6RM3|1|L50|A|284
6RM3|1|L50|A|285
6RM3|1|L50|U|286
6RM3|1|L50|G|287
6RM3|1|L50|U|288
6RM3|1|L50|A|289
6RM3|1|L50|C|290
6RM3|1|L50|U|291
6RM3|1|L50|U|292
6RM3|1|L50|G|293

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LG0

eL8

Chain LHH

uL29

Chain LII

eL36

Chain LL0

eL13

Chain LN0

eL15