J3_6RXU_009
3D structure
- PDB id
- 6RXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGA*UAAUAG*CAUUA
- Length
- 14 nucleotides
- Bulged bases
- 6RXU|1|C1|U|1449
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6RXU|1|C1|U|1217
6RXU|1|C1|G|1218
6RXU|1|C1|A|1219
*
6RXU|1|C1|U|1446
6RXU|1|C1|A|1447
6RXU|1|C1|A|1448
6RXU|1|C1|U|1449
6RXU|1|C1|A|1450
6RXU|1|C1|G|1451
*
6RXU|1|C1|C|1547
6RXU|1|C1|A|1548
6RXU|1|C1|U|1549
6RXU|1|C1|U|1550
6RXU|1|C1|A|1551
Current chains
- Chain C1
- 35S rRNA
Nearby chains
- Chain CU
- Faf1
- Chain Ce
- 40S ribosomal protein S7
- Chain Ch
- 40S ribosomal protein S13-like protein
- Chain Cm
- 40S ribosomal protein S22-like protein
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