J3_6RZZ_007

3D structure

PDB id

6RZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACG*CGCUAAGGAGUG*CUCAC

Length

21 nucleotides

Bulged bases

6RZZ|1|A|A|1263

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RZZ|1|A|G|1230
6RZZ|1|A|A|1231
6RZZ|1|A|C|1232
6RZZ|1|A|G|1233
*
6RZZ|1|A|C|1255
6RZZ|1|A|G|1256
6RZZ|1|A|C|1257
6RZZ|1|A|U|1258
6RZZ|1|A|A|1259
6RZZ|1|A|A|1260
6RZZ|1|A|G|1261
6RZZ|1|A|G|1262
6RZZ|1|A|A|1263
6RZZ|1|A|G|1264
6RZZ|1|A|U|1265
6RZZ|1|A|G|1266
*
6RZZ|1|A|C|1275
6RZZ|1|A|U|1276
6RZZ|1|A|C|1277
6RZZ|1|A|A|1278
6RZZ|1|A|C|1279

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain s

Tyrosine-protein phosphatase YVH1