J3_6SWA_007

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAC*GCUAAGGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

6SWA|1|q|A|1983

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|G|1950
6SWA|1|q|A|1951
6SWA|1|q|C|1952
*
6SWA|1|q|G|1976
6SWA|1|q|C|1977
6SWA|1|q|U|1978
6SWA|1|q|A|1979
6SWA|1|q|A|1980
6SWA|1|q|G|1981
6SWA|1|q|G|1982
6SWA|1|q|A|1983
6SWA|1|q|G|1984
6SWA|1|q|U|1985
6SWA|1|q|G|1986
*
6SWA|1|q|C|1995
6SWA|1|q|U|1996
6SWA|1|q|C|1997
6SWA|1|q|A|1998
6SWA|1|q|C|1999

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains