J3_6SWA_016
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCAUAC*GGC*GUG
- Length
- 12 nucleotides
- Bulged bases
- 6SWA|1|s|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|s|C|9
6SWA|1|s|C|10
6SWA|1|s|A|11
6SWA|1|s|U|12
6SWA|1|s|A|13
6SWA|1|s|C|14
*
6SWA|1|s|G|65
6SWA|1|s|G|66
6SWA|1|s|C|67
*
6SWA|1|s|G|108
6SWA|1|s|U|109
6SWA|1|s|G|110
Current chains
- Chain s
- PREDICTED: Mus musculus 5S ribosomal RNA (LOC115487073), rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain I
- 60S ribosomal protein L10
- Chain R
- 60S ribosomal protein L21
- Chain q
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: